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Mathematical Problems in Molecular Evolution and Next Generation Sequencing

Kobert, Kassian

Abstract:
The focus of this work is the development of new mathematical methods for problems in phylogenetic tree inferences.

In the first part we solve several problems related to so-called partitioned alignments.

In the second part we demonstrate how to calculate all identical subtrees of a given labeled tree. We make use of this to implement an efficient method for avoiding redundant likelihood operations during phylogenetic tree inferences.


Zugehörige Institution(en) am KIT Institut für Theoretische Informatik (ITI)
Publikationstyp Hochschulschrift
Jahr 2016
Sprache Englisch
Identifikator DOI(KIT): 10.5445/IR/1000056076
URN: urn:nbn:de:swb:90-560768
KITopen ID: 1000056076
Verlag Karlsruhe
Umfang 171 S.
Abschlussart Dissertation
Fakultät Fakultät für Informatik (INFORMATIK)
Institut Institut für Theoretische Informatik (ITI)
Prüfungsdaten 02.05.2016
Referent/Betreuer Prof. A. Stamatakis
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