Genesis and Gappa: processing, analyzing and visualizing phylogenetic (placement) data
Abstract:
We present genesis, a library for working with phylogenetic data, and gappa, an accompanying command-line tool for conducting typical analyses on such data. The tools target phylogenetic trees and phylogenetic placements, sequences, taxonomies and other relevant data types, offer high-level simplicity as well as lowlevel customizability, and are computationally efficient, well-tested and field-proven.
| Zugehörige Institution(en) am KIT | Institut für Theoretische Informatik (ITI) |
| Publikationstyp | Zeitschriftenaufsatz |
| Publikationsdatum | 15.05.2020 |
| Sprache | Englisch |
| Identifikator | ISSN: 0266-7061, 1367-4803, 1367-4811, 1460-2059 KITopen-ID: 1000120386 |
| Erschienen in | Bioinformatics |
| Verlag | Oxford University Press (OUP) |
| Band | 36 |
| Heft | 10 |
| Seiten | 3263-3265 |
| Vorab online veröffentlicht am | 04.02.2020 |
| Nachgewiesen in | Dimensions Scopus Web of Science |