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Synergistic approach to probing the dynamics and mechanics of patchy soft matter

Shojib, Md Mozakker H. 1; Monasterio, Asier C. 1; Locatelli, Emanuele; Friederich, Pascal ORCID iD icon 2,3; Ness, Christopher; Stoev, Iliya D. ORCID iD icon 1
1 Institut für Biologische und Chemische Systeme (IBCS), Karlsruher Institut für Technologie (KIT)
2 Institut für Theoretische Informatik (ITI), Karlsruher Institut für Technologie (KIT)
3 Institut für Nanotechnologie (INT), Karlsruher Institut für Technologie (KIT)

Abstract:

Tailoring microscopic details to tune bulk rheology is a key paradigm in soft matter physics, yet the vast parameter space associated with constituent interactions precludes a fully systematic approach. To address this, we have designed a synergistic strategy to explore the parameter space that comprises simulations, experimental rheology, and machine learning. As a case study, we choose DNA-based self-assembled fluids whose viscoelastic response can be fine-tuned by manipulating the base sequencing of the constituent nucleic acid nanostars. We use coarse-grained simulations, benchmarked against experimental data, to obtain the rheology of the DNA fluids, which feeds forward to a framework of Gaussian Process Regression and active learning. The latter is then used to explore the rheological design space with high predictive precision. The pipeline is designed to be deployed iteratively for the rational design and accelerated discovery of generic soft matter suspensions.


Volltext §
DOI: 10.5445/IR/1000198662
Veröffentlicht am 02.11.2026
Originalveröffentlichung
DOI: 10.48550/arXiv.2605.29967
Cover der Publikation
Zugehörige Institution(en) am KIT Institut für Biologische und Chemische Systeme (IBCS)
Institut für Nanotechnologie (INT)
Institut für Theoretische Informatik (ITI)
Publikationstyp Forschungsbericht/Preprint
Publikationsdatum 28.05.2026
Sprache Englisch
Identifikator KITopen-ID: 1000198662
Verlag arxiv
Umfang 17 S.
Schlagwörter Soft Condensed Matter (cond-mat.soft), Materials Science (cond-mat.mtrl-sci), Biological Physics (physics.bio-ph), Computational Physics (physics.comp-ph)
Nachgewiesen in arXiv
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